Alternatived Products of [ 84624-17-9 ]
Product Citations
Protein semisynthesis reveals plasticity in HECT E3 ubiquitin ligase mechanisms
Jiang, Hanjie
;
Miller, Bryant D
;
Viennet, Thibault
, et al.
Nat. Chem.,2024,16,1894-1905.
DOI :
10.1038/s41557-024-01576-z
PubMed ID :
39030419
More
Abstract : Lys ubiquitination is catalysed by E3 ubiquitin ligases and is central to the regulation of protein stability and cell signalling in normal and disease states. There are gaps in our understanding of E3 mechanisms, and here we use protein semisynthesis, chemical rescue, microscale thermophoresis and other biochemical approaches to dissect the role of catalytic base/acid function and conformational interconversion in HECT-domain E3 catalysis. We demonstrate that there is plasticity in the use of the terminal side chain or backbone carboxylate for proton transfer in HECT E3 ubiquitin ligases reactions, with yeast Rsp5 orthologues appearing to be possible evolutionary intermediates. We also show that the HECT-domain ubiquitin covalent intermediate appears to eject the E2 conjugating enzyme, promoting catalytic turnover. These fndings provide key mechanistic insights into how protein ubiquitination occurs and provide a framework for understanding E3 functions and regulation.
Purchased from AmBeed :
84624-17-9 ;
121343-82-6 ;
136083-57-3 ;
1007840-62-1
Product Details of [ 84624-17-9 ]
CAS No. : 84624-17-9
MDL No. : MFCD00062953
Formula :
C20 H21 NO4
Boiling Point :
-
Linear Structure Formula : -
InChI Key : UGNIYGNGCNXHTR-GOSISDBHSA-N
M.W :
339.39
Pubchem ID : 1549479
Synonyms :
Fmoc-D-Val-OH
Calculated chemistry of [ 84624-17-9 ] Expand+
Physicochemical Properties
Num. heavy atoms :
25
Num. arom. heavy atoms :
12
Fraction Csp3 :
0.3
Num. rotatable bonds :
7
Num. H-bond acceptors :
4.0
Num. H-bond donors :
2.0
Molar Refractivity :
94.79
TPSA :
75.63 ?2
Pharmacokinetics
GI absorption :
High
BBB permeant :
Yes
P-gp substrate :
No
CYP1A2 inhibitor :
Yes
CYP2C19 inhibitor :
No
CYP2C9 inhibitor :
Yes
CYP2D6 inhibitor :
No
CYP3A4 inhibitor :
No
Log Kp (skin permeation) :
-5.52 cm/s
Lipophilicity
Log Po/w (iLOGP) :
2.45
Log Po/w (XLOGP3) :
4.02
Log Po/w (WLOGP) :
3.63
Log Po/w (MLOGP) :
2.78
Log Po/w (SILICOS-IT) :
3.15
Consensus Log Po/w :
3.21
Druglikeness
Lipinski :
0.0
Ghose :
None
Veber :
0.0
Egan :
0.0
Muegge :
0.0
Bioavailability Score :
0.56
Water Solubility
Log S (ESOL) :
-4.37
Solubility :
0.0145 mg/ml ; 0.0000427 mol/l
Class :
Moderately soluble
Log S (Ali) :
-5.31
Solubility :
0.00166 mg/ml ; 0.00000489 mol/l
Class :
Moderately soluble
Log S (SILICOS-IT) :
-5.31
Solubility :
0.00165 mg/ml ; 0.00000485 mol/l
Class :
Moderately soluble
Medicinal Chemistry
PAINS :
0.0 alert
Brenk :
0.0 alert
Leadlikeness :
1.0
Synthetic accessibility :
3.78
Application In Synthesis of [ 84624-17-9 ]
* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.
Downstream synthetic route of [ 84624-17-9 ]
1
[ 35661-60-0 ]
[ 35661-39-3 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Trp
[ No CAS ]
(R)-4-[(R)-2-Amino-3-(1H-indol-3-yl)-propionylamino]-4-{(S)-1-[(R)-1-((S)-1-hydrazinocarbonyl-3-methyl-butylcarbamoyl)-2-methyl-propylcarbamoyl]-ethylcarbamoyl}-butyric acid tert-butyl ester
[ No CAS ]
2
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
[ 147-85-3 ]
Fmoc-D-Trp
[ No CAS ]
(R)-4-[(R)-2-Amino-3-(1H-indol-3-yl)-propionylamino]-5-{(S)-2-[(R)-1-((S)-1-hydrazinocarbonyl-3-methyl-butylcarbamoyl)-2-methyl-propylcarbamoyl]-pyrrolidin-1-yl}-5-oxo-pentanoic acid tert-butyl ester
[ No CAS ]
3
[ 71989-33-8 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
pentanedioic acid mono-(2-{ethyl-[4-(4-nitrophenylazo)-phenyl]amino}-ethyl) ester
[ No CAS ]
2-(3-<i>tert</i>-butoxy-2-{4-<i>tert</i>-butoxycarbonyl-2-[4-(2-{ethyl-[4-(4-nitro-phenylazo)-phenyl]-amino}-ethoxycarbonyl)-butyrylamino]-butyrylamino}-propionylamino)-3-methyl-butyric acid
[ No CAS ]
4
[ 1160862-48-5 ]
[ 35661-38-2 ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Tyr(O-tBu)-OH
[ No CAS ]
N-FMOC-O-tert-butyl-D-threonine
[ No CAS ]
C36 H56 N8 O11
[ No CAS ]
5
[ 1160862-48-5 ]
[ 35661-38-2 ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Tyr(O-tBu)-OH
[ No CAS ]
N-α-[(9H-fluoren-9-ylmethoxy)carbonyl]-NG -(2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl)-D-arginine
[ No CAS ]
[ 1160862-39-4 ]
6
[ 1160862-48-5 ]
[ 35661-38-2 ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
N-FMOC-O-tert-butyl-D-threonine
[ No CAS ]
N-α-[(9H-fluoren-9-ylmethoxy)carbonyl]-NG -(2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl)-D-arginine
[ No CAS ]
C33 H59 N11 O10
[ No CAS ]
7
[ 1160862-48-5 ]
[ 35661-38-2 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Tyr(O-tBu)-OH
[ No CAS ]
N-FMOC-O-tert-butyl-D-threonine
[ No CAS ]
N-α-[(9H-fluoren-9-ylmethoxy)carbonyl]-NG -(2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl)-D-arginine
[ No CAS ]
C36 H57 N11 O11
[ No CAS ]
8
[ 353491-47-1 ]
[ 67-56-1 ]
[ 1730-89-8 ]
[ 178924-05-5 ]
[ 68858-20-8 ]
[ 118904-37-3 ]
[ 71989-35-0 ]
[ 109425-55-0 ]
[ 71989-31-6 ]
[ 84624-17-9 ]
(4S)-MeHex-D-Val-Thr(tBu)-Val-D-Val-D-Pro-Orn(Boc)-D-aIle-D-Dpr(H-Phe-(Z)Dhb-Val)(Me)-D-aIle-D-Val-OH
[ No CAS ]
9
[ 353491-47-1 ]
[ 1730-89-8 ]
[ 178924-05-5 ]
[ 68858-20-8 ]
[ 118904-37-3 ]
[ 71989-35-0 ]
[ 109425-55-0 ]
[ 71989-31-6 ]
[ 84624-17-9 ]
(4S)-MeHex-D-Val-Thr(tBu)-Val-D-Val-D-Pro-Orn(Boc)-D-aIle-D-Dpr(H-Phe-(Z)Dhb-Val)-D-aIle-D-Val-OH
[ No CAS ]
10
[ 1730-89-8 ]
[ 178924-05-5 ]
[ 68858-20-8 ]
[ 118904-37-3 ]
[ 71989-35-0 ]
[ 109425-55-0 ]
[ 71989-31-6 ]
[ 84624-17-9 ]
(4S)-MeHex-D-Val-Thr(tBu)-Val-D-Val-D-Pro-Orn(Boc)-D-aIle-D-Dpr-D-aIle-D-Val-OH
[ No CAS ]
11
Fmoc-Leu-preloaded Wang resin, deprotected
[ No CAS ]
[ 35661-60-0 ]
[ 35661-60-0 ]
[ 77128-73-5 ]
[ 84624-17-9 ]
[ 1252661-12-3 ]
12
C9 H10 NO2 Pol
[ No CAS ]
[ 122889-11-6 ]
[ 86123-10-6 ]
[ 84624-17-9 ]
[ 135673-97-1 ]
[ 1252661-22-5 ]
13
Phe-Wang resin
[ No CAS ]
[ 122889-11-6 ]
[ 77128-73-5 ]
[ 84624-17-9 ]
[ 135673-97-1 ]
[ 1190394-43-4 ]
14
C6 H12 NO2 Pol
[ No CAS ]
[ 35661-60-0 ]
[ 103478-62-2 ]
[ 77128-73-5 ]
[ 84624-17-9 ]
[ 1252661-13-4 ]
15
C18 H17 N2 O3 Pol
[ No CAS ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
C23 H42 N5 O6 Pol
[ No CAS ]
16
[ 144-49-0 ]
C19 H17 NO7 S
[ No CAS ]
[ 35661-38-2 ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Tyr(O-tBu)-OH
[ No CAS ]
N-FMOC-O-tert-butyl-D-threonine
[ No CAS ]
(R)-Bgl-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 FA salt
[ No CAS ]
17
[ 144-49-0 ]
C19 H17 NO7 S
[ No CAS ]
[ 35661-38-2 ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Tyr(O-tBu)-OH
[ No CAS ]
N-α-[(9H-fluoren-9-ylmethoxy)carbonyl]-NG -(2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl)-D-arginine
[ No CAS ]
D-Arg-D-Tyr-(R)-Bgl-D-Val-D-Glu-D-Leu-D-Ala-NH2 FA salt
[ No CAS ]
18
[ 144-49-0 ]
C19 H17 NO7 S
[ No CAS ]
[ 35661-38-2 ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
N-FMOC-O-tert-butyl-D-threonine
[ No CAS ]
N-α-[(9H-fluoren-9-ylmethoxy)carbonyl]-NG -(2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl)-D-arginine
[ No CAS ]
D-Arg-(R)-Bgl-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 FA salt
[ No CAS ]
19
[ 144-49-0 ]
C19 H17 NO7 S
[ No CAS ]
[ 35661-38-2 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Tyr(O-tBu)-OH
[ No CAS ]
N-FMOC-O-tert-butyl-D-threonine
[ No CAS ]
N-α-[(9H-fluoren-9-ylmethoxy)carbonyl]-NG -(2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl)-D-arginine
[ No CAS ]
D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-(R)-Bgl-D-Ala-NH2 FA salt
[ No CAS ]
20
[ 144-49-0 ]
C19 H17 NO7 S
[ No CAS ]
[ 35661-38-2 ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Tyr(O-tBu)-OH
[ No CAS ]
N-FMOC-O-tert-butyl-D-threonine
[ No CAS ]
(S)-Bgl-D-Tyr-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 FA salt
[ No CAS ]
21
[ 144-49-0 ]
C19 H17 NO7 S
[ No CAS ]
[ 35661-38-2 ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Tyr(O-tBu)-OH
[ No CAS ]
N-α-[(9H-fluoren-9-ylmethoxy)carbonyl]-NG -(2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl)-D-arginine
[ No CAS ]
D-Arg-D-Tyr-(S)-Bgl-D-Val-D-Glu-D-Leu-D-Ala-NH2 FA salt
[ No CAS ]
22
[ 144-49-0 ]
C19 H17 NO7 S
[ No CAS ]
[ 35661-38-2 ]
[ 35661-60-0 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
N-FMOC-O-tert-butyl-D-threonine
[ No CAS ]
N-α-[(9H-fluoren-9-ylmethoxy)carbonyl]-NG -(2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl)-D-arginine
[ No CAS ]
D-Arg-(S)-Bgl-D-Thr-D-Val-D-Glu-D-Leu-D-Ala-NH2 FA salt
[ No CAS ]
23
[ 144-49-0 ]
C19 H17 NO7 S
[ No CAS ]
[ 35661-38-2 ]
[ 104091-08-9 ]
[ 84624-17-9 ]
Fmoc-D-Tyr(O-tBu)-OH
[ No CAS ]
N-FMOC-O-tert-butyl-D-threonine
[ No CAS ]
N-α-[(9H-fluoren-9-ylmethoxy)carbonyl]-NG -(2,2,4,6,7-pentamethyldihydrobenzofuran-5-sulfonyl)-D-arginine
[ No CAS ]
D-Arg-D-Tyr-D-Thr-D-Val-D-Glu-(S)-Bgl-D-Ala-NH2 FA salt
[ No CAS ]