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[ CAS No. 56-84-8 ] {[proInfo.proName]}

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Chemical Structure| 56-84-8
Chemical Structure| 56-84-8
Structure of 56-84-8 * Storage: {[proInfo.prStorage]}

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Product Citations

Product Citations

Yangfeng Li ; Zhengnan Shen ; Kiira Ratia , et al. DOI:

Abstract: The bromodomain and extra-terminal domain (BET) proteins are epigenetic readers, regulating transcription via two highly homologous tandem bromodomains, BD1 and BD2. Clinical development of nonselective pan-BD BET inhibitors has been challenging, partly due to dose-limiting side effects such as thrombocytopenia. This has prompted the push for domain-selective BET inhibitors to achieve a more favorable therapeutic window. We report a structure-guided drug design campaign that led to the development of a potent BD1-selective BET inhibitor, 33 (XL-126), with a Kd of 8.9 nM and 185-fold BD1/BD2 selectivity. The high selectivity was first assayed by SPR, validated by a secondary time-resolved fluorescence energy transfer assay, and further corroborated by BROMOscan (~57–373 fold selectivity). The cocrystal of 33 with BRD4 BD1 and BD2 demonstrates the source of selectivity: repulsion with His437 and lost binding with the clamp. Notably, the BD1 selectivity of BET inhibitor 33 leads to both the preservation of platelets and potent anti-inflammatory efficacy.

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Product Details of [ 56-84-8 ]

CAS No. :56-84-8 MDL No. :MFCD00002616
Formula : C4H7NO4 Boiling Point : -
Linear Structure Formula :H2NCH(CH2CO2H)CO2H InChI Key :CKLJMWTZIZZHCS-REOHCLBHSA-N
M.W : 133.10 Pubchem ID :5960
Synonyms :
Chemical Name :(S)-2-Aminosuccinic acid

Calculated chemistry of [ 56-84-8 ]      Expand+

Physicochemical Properties

Num. heavy atoms : 9
Num. arom. heavy atoms : 0
Fraction Csp3 : 0.5
Num. rotatable bonds : 3
Num. H-bond acceptors : 5.0
Num. H-bond donors : 3.0
Molar Refractivity : 27.59
TPSA : 100.62 ?2

Pharmacokinetics

GI absorption : High
BBB permeant : No
P-gp substrate : No
CYP1A2 inhibitor : No
CYP2C19 inhibitor : No
CYP2C9 inhibitor : No
CYP2D6 inhibitor : No
CYP3A4 inhibitor : No
Log Kp (skin permeation) : -9.87 cm/s

Lipophilicity

Log Po/w (iLOGP) : -0.09
Log Po/w (XLOGP3) : -3.89
Log Po/w (WLOGP) : -1.13
Log Po/w (MLOGP) : -3.59
Log Po/w (SILICOS-IT) : -1.49
Consensus Log Po/w : -2.04

Druglikeness

Lipinski : 0.0
Ghose : None
Veber : 0.0
Egan : 0.0
Muegge : 3.0
Bioavailability Score : 0.56

Water Solubility

Log S (ESOL) : 1.98
Solubility : 12800.0 mg/ml ; 96.3 mol/l
Class : Highly soluble
Log S (Ali) : 2.37
Solubility : 31400.0 mg/ml ; 236.0 mol/l
Class : Highly soluble
Log S (SILICOS-IT) : 1.31
Solubility : 2730.0 mg/ml ; 20.5 mol/l
Class : Soluble

Medicinal Chemistry

PAINS : 0.0 alert
Brenk : 0.0 alert
Leadlikeness : 1.0
Synthetic accessibility : 1.8

Safety of [ 56-84-8 ]

Signal Word:Warning Class:N/A
Precautionary Statements:P261-P305+P351+P338 UN#:N/A
Hazard Statements:H302-H315-H319-H335 Packing Group:N/A
GHS Pictogram:

Application In Synthesis of [ 56-84-8 ]

* All experimental methods are cited from the reference, please refer to the original source for details. We do not guarantee the accuracy of the content in the reference.

  • Upstream synthesis route of [ 56-84-8 ]
  • Downstream synthetic route of [ 56-84-8 ]

[ 56-84-8 ] Synthesis Path-Upstream   1~3

  • 1
  • [ 50720-05-3 ]
  • [ 56-84-8 ]
  • [ 2456-73-7 ]
Reference: [1] Journal of Organic Chemistry, 1958, vol. 23, p. 1776
  • 2
  • [ 87-51-4 ]
  • [ 56-84-8 ]
  • [ 2456-73-7 ]
Reference: [1] Journal of Biological Chemistry, 2018, vol. 293, # 46, p. 17731 - 17738
  • 3
  • [ 56-84-8 ]
  • [ 100-51-6 ]
  • [ 6327-59-9 ]
Reference: [1] Bioorganic and Medicinal Chemistry, 2010, vol. 18, # 17, p. 6220 - 6229
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